pm4ngs
stable
1. Installation
2. PM4NGS on Ubuntu
3. PM4NGS on Windows Subsystem for Linux
4. PM4NGS on GCP instance with Ubuntu
5. Sample sheet
6. Differential Gene expression and GO enrichment from RNA-Seq data
7. Differential Binding detection from ChIP-Seq data
8. Detection of binding events from ChIP-exo data
9. Transcriptome Annotation pipeline for non-model organisms
10. Create a new PM4NGS pipeline
11. Utils
11.1. STAR Genomic Indexes
11.2. BWA Genomic Indexes
11.3. Create BED from GTF
12. PM4NGS available genomes
pm4ngs
Docs
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11. Utils
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11. Utils
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11.1. STAR Genomic Indexes
11.2. BWA Genomic Indexes
11.3. Create BED from GTF